PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027115736.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 698aa MW: 77230 Da PI: 5.6135 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43.9 | 4.2e-14 | 494 | 540 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR+++N++f Lr+l+P +K++Ka+iL ++eY+k+L+ XP_027115736.1 494 NHVLAERRRREKLNERFIILRSLVPFV-----TKMDKASILGDTIEYVKQLR 540 7999**********************8.....8*****************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 698 aa Download sequence |
MAAPPSSRQL QHMLQRAVQT VEWTYSLFWQ LCSQQRILVW GDGYYNGAIK TRKTVQPMEV 60 SAEEASLQRS QQLRELYDAL SSGDTNQQQQ QARRPSASLS PEDLTESEWF YLMCVSFSFA 120 PGVGLPGRAY AKRQHVWLTG ANEVDSKLFT RAILAKTVVC IPLLDGVVEL GTVERVQEDL 180 GFVQHIKSIF AEHQQPHQTP KPALSEHSTS SPATASGPRF HSSTVPVPAT YTTIHTSQDN 240 SDQIEEEEEE GEDDEEDADA DAVADSDSDG ETVPQSSAPS SGVQNPNSMP QIKTTEPSEL 300 VQLDMSEDIR LGSPEDGSNN WDSDYHLLPH GPNKNQEVQQ NRPDLCSSQS TPRWPRIQDP 360 GINHSLEPAP TTSGVPLSEN EFAQEDSHFS QTVSTVLHHQ SSRCSSSSMT GNVTQSIHSA 420 FSKWPATSCD SLAHGNLRGS SSQWTLKYIL FTVPFLHASN SGDETSPKSR DAAAISDSAS 480 RLRKGTPQEE LSANHVLAER RRREKLNERF IILRSLVPFV TKMDKASILG DTIEYVKQLR 540 KKIQELEASF RQMEADGHPK KNAKEQRSSS NNTAARVQVG QGLDRRKMRI VEGSPTGGGK 600 PKAAVVSPAE GVLQVEVSII ESDALVELQC PHREGLLLDV MQMLRELRVE ITAVQSSLSN 660 GFFVAELRAK VKEYGNGRRA TIMEVKRAIN QIIPQYLL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 499 | 504 | ERRRRE |
2 | 500 | 505 | RRRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09820.1 | 5e-92 | bHLH family protein |