PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027115608.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 306aa    MW: 33646.7 Da    PI: 5.609
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027115608.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY73.92e-23104165159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dg++WrKYGqKe+ ++++pr Y+rCt++   gC+++k+v+r +e+p + ++tY g+H+++
  XP_027115608.1 104 VEDGHAWRKYGQKEILNTTYPRCYFRCTHKhdqGCKATKQVQRIKEEPVMYQTTYFGHHTCS 165
                     58***************************99999**************************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MDLPNPQQLR TIQETVIGKL LKGKESATQL VALLKKPRSS GDRGGSVSAE ELALQIFRSF  60
SESISAFSSL EGKGNGICQI VAADGVVRVS PNVAQSSIIV SSTVEDGHAW RKYGQKEILN  120
TTYPRCYFRC THKHDQGCKA TKQVQRIKEE PVMYQTTYFG HHTCSDTLMR APQIISDTDP  180
MDSCLLSFET KAPIKQNLLY PNRVMTTATA TGNQEFKDET QSDVSDNKSC LDSSTMLQNP  240
TTNSETSGRR SSNVNGAYHE EVVSGMHSCS STPLQGLDME DFSTKFDDLD DHLLFDDMAG  300
LLPALS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.14e-28WRKY family protein