PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027115608.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 306aa MW: 33646.7 Da PI: 5.609 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 73.9 | 2e-23 | 104 | 165 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqKe+ ++++pr Y+rCt++ gC+++k+v+r +e+p + ++tY g+H+++ XP_027115608.1 104 VEDGHAWRKYGQKEILNTTYPRCYFRCTHKhdqGCKATKQVQRIKEEPVMYQTTYFGHHTCS 165 58***************************99999**************************96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 306 aa Download sequence |
MDLPNPQQLR TIQETVIGKL LKGKESATQL VALLKKPRSS GDRGGSVSAE ELALQIFRSF 60 SESISAFSSL EGKGNGICQI VAADGVVRVS PNVAQSSIIV SSTVEDGHAW RKYGQKEILN 120 TTYPRCYFRC THKHDQGCKA TKQVQRIKEE PVMYQTTYFG HHTCSDTLMR APQIISDTDP 180 MDSCLLSFET KAPIKQNLLY PNRVMTTATA TGNQEFKDET QSDVSDNKSC LDSSTMLQNP 240 TTNSETSGRR SSNVNGAYHE EVVSGMHSCS STPLQGLDME DFSTKFDDLD DHLLFDDMAG 300 LLPALS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G56400.1 | 4e-28 | WRKY family protein |