PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027115452.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 606aa MW: 66518.9 Da PI: 6.837 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.5 | 1e-12 | 439 | 485 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq XP_027115452.1 439 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYITELQ 485 799***********************66......*****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 606 aa Download sequence |
MKFEVGMGGL IWNDEDKTVV AAVLGTKAFD YLFSSSLSAE GSLMAMGNDE NLQNKLSDLV 60 EHPNSSNFSW NYAIFWQISR SKSGDLVLGW GDGCCREPRE GEESEVTRIL NLRLEDETQQ 120 RMRKRVLQKL HTCFGGSDED SYAFGLDRVT DTEMFFLASM YFSFPRGEGG PGKSFGSGKH 180 LWVSDALKSS ADYCVRSFLA KSAGMQTLVL IPTDVGVVEL GSVRSIPESL ELMQSVRSSF 240 SSFSSFIRAK QAAAAVMGAD KKDGNAPCPN LGIGERPDGI PKIFGQDLNP GNPQSREKLA 300 IRKPNEEHWD GYPNGNRIAF PSPRNGIHGA TWTTFSHVKP GNGAELYSPQ TQTSKLQGLV 360 NGSGDEFRLG NFQHQKPTQM QIDFTGATSR PVISRPLCVD SEHSDVEASC KEDVSVLGDE 420 KRPRKRGRKP ANGREEPLNH VEAERQRREK LNQRFYALRA VVPNISKMDK ASLLGDAIAY 480 ITELQKKLKD MESERDKFGS ASRDALPSEA SPSSDVQSLV PEIDIQGAHD KVIVKVSCPL 540 DTHPASRVIH GLKEAGVNVI ESKLAAGNDK VFHTFVVKPQ GSEQLTKDKL IAAISRSCES 600 TSLQAL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 421 | 429 | KRPRKRGRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01260.1 | 0.0 | bHLH family protein |