|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
XP_027114789.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
|
Family |
GATA |
Protein Properties |
Length: 166aa MW: 18623.7 Da PI: 10.7119 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_027114789.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 61.8 | 8.4e-20 | 27 | 60 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
C+ C+ttkTplWR+gp g+k+LCnaCG+++rkk+
XP_027114789.1 27 CVDCKTTKTPLWRSGPAGPKSLCNACGIRHRKKR 60
********************************98 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 166 aa
Download sequence |
MDPNKKVEEE ILPPQEMITR TVDEKCCVDC KTTKTPLWRS GPAGPKSLCN ACGIRHRKKR 60 AATGTSPATS TATVGLDKEE EKIKKEKHEE TIAKKKRRAN IRDGKCGKLS VGWRQRFRAF 120 GQGVVLYQRQ RSPVLRKRQS IHHRKLGEVE QAAVLLMALS CGSVFA
|
Nucleic Localization
Signal ? help
Back to Top |
|
No. |
Start |
End |
Sequence |
1 | 57 | 87 | RKKRAATGTSPATSTATVGLDKEEEKIKKEK |
2 | 94 | 98 | KKKRR |