PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027114695.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 356aa MW: 39190.3 Da PI: 5.1459 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43.4 | 6.1e-14 | 180 | 225 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ ++f L ++P + kK++K++iL A+eY+k+Lq XP_027114695.1 180 HIIAERKRREQLSQRFMALSAIVPGL-----KKMDKSSILGDAIEYLKHLQ 225 899***********************.....9******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 356 aa Download sequence |
MDNSASSWFS QLGMEDPLSN DDFNIMDFLN DELSAALADD FQNSSFPEGN PSFSNIFPSC 60 NSTPALCEPS GMEAHPVGFE TPAKQHKTNG YDSSNIHNMP NFGQASSSPM ILTFGNPNMP 120 EINPHQVTLG TLNPEDDAVS EVLTSHGSFA KLDEAAKTTV QTKAKKPGGR VRPPSQTYDH 180 IIAERKRREQ LSQRFMALSA IVPGLKKMDK SSILGDAIEY LKHLQERVKT LEEKAARQTM 240 ESVVLVKRSQ LLLEDERSSD EMAGPNEQPL PEFEAKVCDK NVLLRIHCKN YKGVLIKILS 300 QIDKLNLAVV NTCVSAFGNF ALDVTIIAEA EKEVNLTTKE LVDTLRSALQ QGKHAA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 184 | 189 | ERKRRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37850.1 | 2e-53 | bHLH family protein |