PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027114691.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family bHLH
Protein Properties Length: 302aa    MW: 33584.2 Da    PI: 5.1266
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027114691.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.98.7e-09126171555
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     h  +Er+ R+++ ++f  L  ++P +     kK++K ++L  A+ Y+k+Lq
  XP_027114691.1 126 HILAERKHREQLSQGFVALSAIVPGL-----KKMDKTSVLGDAIIYLKHLQ 171
                     8899**********************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MDYFDEDFTT GLGEDLESNL SAVSVMEAPP ISIEIREPQQ SSNRCNSAAT LENMPNHHNQ  60
PIILTFGNPS TPEINPQPLN LEDDRVVSEV LTSHGSFVNL EEEAQNARKK KKTGGRVRPA  120
LQIHDHILAE RKHREQLSQG FVALSAIVPG LKKMDKTSVL GDAIIYLKHL QERVKTLEEQ  180
VAQQTMQSVV LVKRSQLLVE DEGSSDDTGG PDEQPLPEIE AKMRNRNILL RIHCEKHKGV  240
LVQILSEVEK HNLAVMNTCV APFGNLALDI TIITEMEKEF SLTIQELVKI LGSALHRGTV  300
AD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.11e-51bHLH family protein