PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027114411.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family GeBP
Protein Properties Length: 477aa    MW: 52747.1 Da    PI: 4.5867
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027114411.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573121.63.8e-38161259297
          DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93 
                     lfqrlw++eDei lLqG++++++++g+   s ++d++afy+++k++++++++k+qlveK+rrLKkK+++ ++k++sgke +f+++hdq +fe+s+
  XP_027114411.1 161 LFQRLWTDEDEIELLQGFLEYTTSRGVinsSHHHDTTAFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVMNKMSSGKEYVFKSPHDQATFEISR 255
                     79************************99845556************************************************************* PP

          DUF573  94 kiWg 97 
                     kiWg
  XP_027114411.1 256 KIWG 259
                     ***8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 477 aa     Download sequence    
MAASQEDRNV YNPEDLDDDE EDEEGIGGLI HNPGNNTNDI NPPENDVVVD DEDDDVDVDV  60
DVDEDDDVDD STSSSNLAAA DHHHHDPSSL LNHHHHHHIH LPPPPSLSPG DVTVALPTDQ  120
SLRPDAERQR IDEVTVASVS AVARAVVEEK KPVPNDESRR LFQRLWTDED EIELLQGFLE  180
YTTSRGVINS SHHHDTTAFY DQIKSKLQLD FNKNQLVEKL RRLKKKYRNV MNKMSSGKEY  240
VFKSPHDQAT FEISRKIWGG SGVGASVRSG VVMEEGGFDD DDGNPNFSVN FIDQSPNPNF  300
NLNPNGIDHL EKKPPRSRKR SRGVGGVKIE EKPFGYTSVP TLQNSNQQQS VQNVQNMQNV  360
GVVTPTATQI GPVTAAAGSA GSGQATNLIE ETVRSCLSPI FKELLNSVMS LNGPMMGGSR  420
GFGFALSPMP LGLNGDLVAD EKWRKQQILE LEVYSKRLEL VQDQIKAQLE ELRSMGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.28e-51GeBP family protein