PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027113402.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 234aa    MW: 26512 Da    PI: 8.3094
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027113402.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY103.31.4e-32160218159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vk+s +prsYYrCt+++C+vkk+ver +ed ++v++tYeg+Hnh+
  XP_027113402.1 160 LDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHS 218
                     59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MEGERSASGL HLNPNYELPP SFSAPHPIPE MGFVQFEDHH QVLSFLAPSS QSSHISSQTL  60
HGGGENNHTN SSTTSNHNGS FGFRHNELVA TSTRPSWNND QVGSLNPKAV GDQNCATNNA  120
NEGTNSWWRS SASEKGKVKV RRKLREPRFC FQTRSDVDVL DDGYKWRKYG QKVVKNSLHP  180
RSYYRCTHNN CRVKKRVERL SEDCRMVITT YEGRHNHSPC DDSNSSEHEC FTSF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1139145KVRRKLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44745.12e-69WRKY family protein