PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027113247.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 241aa    MW: 27189.5 Da    PI: 6.1718
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027113247.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR187.12.6e-2771159189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                     kfY +YA++vGF vr+ + ++s+++g++  r++ C+k+g++ +++ +  + +r+r + r gCka++ vk+ek+gkw+vt+++++HnH+l
  XP_027113247.1  71 KFYIDYARKVGFVVRIMQRRRSETDGRTLARRLGCNKQGFSPNNQGSVASGKRPRCSAREGCKATILVKMEKSGKWVVTRFVKDHNHPL 159
                     6**************************************************************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MLDLDKEDRN REEENNSEGK EGEDVVGEGN AEELDANDVM DVDGNTGQLK DSEVLEPYVG  60
MEFESEDAAR KFYIDYARKV GFVVRIMQRR RSETDGRTLA RRLGCNKQGF SPNNQGSVAS  120
GKRPRCSARE GCKATILVKM EKSGKWVVTR FVKDHNHPLI ISARGVSNGV RFLPNVDKDK  180
KIEQLTLELQ RQDQLCTAYR NKLLNFLASV EEQGEHLSSK INGVIENVKK IEAEIQKSSC  240
H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12850.12e-70FAR1 family protein