PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027112850.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | CAMTA | ||||||||
Protein Properties | Length: 1062aa MW: 118349 Da PI: 6.2261 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 182.5 | 4.9e-57 | 20 | 136 | 3 | 118 |
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwl++ ei++iL n++k+ +t e++ +p sgs++L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+v++l+cyYah+een++fqr XP_027112850.1 20 SEaQHRWLRPAEICEILRNYQKFYITPEPPVKPASGSVFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDMLHCYYAHGEENENFQR 114 4449******************************************************************************************* PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+Le++l +iv+vhylevk XP_027112850.1 115 RSYWMLEQDLMHIVFVHYLEVK 136 *******************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1062 aa Download sequence |
MAGSGSQNLG FRFDIKQILS EAQHRWLRPA EICEILRNYQ KFYITPEPPV KPASGSVFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSVDMLH CYYAHGEENE NFQRRSYWML 120 EQDLMHIVFV HYLEVKGNKA NIQCLKDAGT VSSNSQDDSS LSFGSPANSD RLASPYTDMT 180 SPTSTLTSAC EDAESEINHP ASSRFHPYLE TTQEDFRGLE NLDAGFSSSY NVLQSLGGQP 240 TSSASVHDGC TVDHPKSNFV PGVERTLDSA SWEEVLGQCT TGMVGDGHKS WNAPAHQANW 300 QGDCLSPMQG VPLSQNLIPD SAYYGKGSLW EQKSISALLQ SAADPFYMRP DGQEDEAVER 360 DVQKLRQNVE AGYMMSYKAE TSVPSAGSGN CSLVLKQPHL SGIQAEESLK KVDSFSRWMA 420 KELGEVEELP LHSTNGYSWS VIQTEDVVGD SCTPTQLQLD ADTLNFSLSQ DQLFSITDFS 480 PNWAYSRLET KVLITGRFLK SGQEFTRYKW SCMFGELEVP AEVLSGGVLC CHAPPHKAGL 540 VPFYVTCSNR LACSEVREFE YRAGPSQEID FADIPGSDAI EVHLQRRLEK LFLTGPIGST 600 QSVSETITDK KEVVNKIFLL MEAEYNQMAT LSPRDVSPPN GIEEQHGEKL LKEKFYTWLI 660 QKVTEGGKGP SLLDDEGQGV LHLAAALGFN WAIKPVIISG ISIDFRDVNG WTALHWAALC 720 GREDTVAVLV SLGAAPGALT DPSAEHPLAR TPADLASANG HKGIAGFLAE CSLTTHLSTL 780 TVKDSKDDDT LQYSEAKAIK TVSERVASPI TEQDVPDSLS LKDSMAAVCN ATQAAARIHQ 840 IFRIQSFQRK QLDIQHINES SSMDEHTLSL IAAKTSRLGK NDWTAHGAAI SIQKKFRGWK 900 KRKEFLIIRQ RIVKIQAHVR GHQVRKKYKT IIWSVGILEK VILRWRRKGS GLRGFRPDAV 960 AKCPSAENMP RKDDDYDFLK EGRKQTEERL QKALSRVKSM AQYPEARAQY RRLLTVAEGF 1020 RETEDTSNPT LSGSEDVSYA DEELFDVEKL SDHDTFMSMA FE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 900 | 929 | KKRKEFLIIRQRIVKIQAHVRGHQVRKKYK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64220.2 | 0.0 | CAMTA family protein |