PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027112727.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 333aa MW: 37746.8 Da PI: 7.0023 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40.1 | 6.6e-13 | 158 | 205 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h ++Er+RR+++ ++f L l+P + kK++Ka++L A++Y+k+Lq XP_027112727.1 158 QDHIMAERKRREKLSQRFIALSALVPGL-----KKMDKASVLGDAIKYLKQLQ 205 6799************************.....9******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 333 aa Download sequence |
MEIYNFRSLG ELGMDHGFSN HWSMSSLDEL STISSLAAPY HDNLHMHSSQ PMFSQKHSME 60 MSLNDANRPM KQQKTSSWSS SNSDHLSNAN FHVVNSSIYS DQVATVKPKE ETMSSVTMSF 120 SPDMIVSHGS YDQNQNYVFK ASQGAKRVST NARLTQAQDH IMAERKRREK LSQRFIALSA 180 LVPGLKKMDK ASVLGDAIKY LKQLQEKVKT LEEEARKNSM ERVVYVSKYT LCDDGHEDSS 240 SDENFCDEPL PEVEAKFCNK EVLIRVHCEK RKGIQEKTIA EIEKLPLSVI NNSAMTFGGS 300 TLDITVTAKM EEEFAMPIKD LVKHLRSELK KFM |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 164 | 169 | ERKRRE |
2 | 165 | 170 | RKRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37850.1 | 5e-61 | bHLH family protein |