PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027112510.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bZIP

Protein Properties

Length: 378aa MW: 40592.8 Da PI: 10.5233

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027112510.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43.5	7e-14	300	352	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r rr++kNRe+A rsR+RK+a++ eLe +v++L++ N++L+k+ el ++ + XP_027112510.1 300 RRRRRMIKNRESAARSRARKQAYTLELEAEVAKLKELNEELQKKQVELMEMQK 352 5789999************************************9999998865 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MNMEDLLKNI WTAEETQVNA TVERNGTTPA GNLQRQGSLT LPRTLSQRTV DEVWKDLFKE 60 NGGAKDGSGG GSSNLVPREP TLGEMTLEDF LVRAGVVRED AQPTGKASNG GFYAGLVQSG 120 GIDNGLNIGF HQPARDQGVL GNQMAKSKNA LSNPSNLILN GDGVRSSQQQ QNQQPPLQPL 180 FPKQATVAFA SPLPLGNSVQ QIGNNAQLAS PGPNASVVGM TTATSTVAQG GVAPTGVMGI 240 AGLRGLTTAA AGGSPGNHLH SDVISKSSLD SPSLSPSPYA FNEVGRGRRS SSTLEKQVER 300 RRRRMIKNRE SAARSRARKQ AYTLELEAEV AKLKELNEEL QKKQVELMEM QKNQMLETMK 360 MPWGGKRRCL RRTLTGPW

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MNMEDLLKNI WTAEETQVNA TVERNGTTPA GNLQRQGSLT LPRTLSQRTV DEVWKDLFKE  60
NGGAKDGSGG GSSNLVPREP TLGEMTLEDF LVRAGVVRED AQPTGKASNG GFYAGLVQSG  120
GIDNGLNIGF HQPARDQGVL GNQMAKSKNA LSNPSNLILN GDGVRSSQQQ QNQQPPLQPL  180
FPKQATVAFA SPLPLGNSVQ QIGNNAQLAS PGPNASVVGM TTATSTVAQG GVAPTGVMGI  240
AGLRGLTTAA AGGSPGNHLH SDVISKSSLD SPSLSPSPYA FNEVGRGRRS SSTLEKQVER  300
RRRRMIKNRE SAARSRARKQ AYTLELEAEV AKLKELNEEL QKKQVELMEM QKNQMLETMK  360
MPWGGKRRCL RRTLTGPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34000.1	3e-53	bZIP family protein