PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027111597.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 127aa MW: 13923.8 Da PI: 10.3195

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027111597.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.2	9.2e-34	66	119	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH++Fv+ave+LGG+e+AtPk +l+lm+vkgL+++hvkSHLQ+YR+ XP_027111597.1 66 PRLRWTPDLHRCFVQAVEKLGGQERATPKLVLQLMNVKGLSIAHVKSHLQMYRS 119 8****************************************************7 PP
2	Myb_DNA-binding	55.4	1.4e-17	67	118	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +v+av++lGg t+k++ + m+ kg++ ++ks++q+y+ XP_027111597.1 67 RLRWTPDLHRCFVQAVEKLGGQeraTPKLVLQLMNvKGLSIAHVKSHLQMYR 118 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 127 aa Download sequence
MEEKGNFSDG LPEVNSSDHG MKDGGGSDEP KTSGSSSSNS MAEESTGKKL SSSATGVRQY 60 VRSKMPRLRW TPDLHRCFVQ AVEKLGGQER ATPKLVLQLM NVKGLSIAHV KSHLQMYRSR 120 ILMTTVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	2e-35	G2-like family protein