PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027111427.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NF-YB | ||||||||
Protein Properties | Length: 149aa MW: 16908.1 Da PI: 7.2948 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 173 | 3.3e-54 | 4 | 99 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +eqdr+lPianv+rimk++lPanakisk+aket+qec+sefisfvt+easdkc++ekrkt+ngdd++wal++lGf++y+eplk yl+++relege+ XP_027111427.1 4 KEQDRLLPIANVGRIMKQILPANAKISKEAKETMQECASEFISFVTGEASDKCHKEKRKTVNGDDICWALGSLGFDEYAEPLKRYLNRFRELEGER 99 89*******************************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence |
MVIKEQDRLL PIANVGRIMK QILPANAKIS KEAKETMQEC ASEFISFVTG EASDKCHKEK 60 RKTVNGDDIC WALGSLGFDE YAEPLKRYLN RFRELEGERA NQNKSGNSEE KVMNQNLAEP 120 RKITTHVSPT SINFNFMDES SNSLSRSCF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47810.1 | 1e-63 | NF-YB family protein |