PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027110762.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 264aa MW: 29194.2 Da PI: 7.8944 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 44 | 4e-14 | 79 | 125 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+h+e+E+rRRdriN +++Lr+l+Pk+ +K++Ka+ L +ve++k++ XP_027110762.1 79 RSHSEAEKRRRDRINAQLATLRKLIPKS-----EKMDKAALLGSVVEHVKEM 125 78*************************8.....8***************987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 264 aa Download sequence |
MANCFSSADL QEDAAWKVCH QAAVEQNSMD LPFLAPQLNN NSTPDEASSF NFDGYPFSLH 60 PWSIPAEGFA EGRAASASRS HSEAEKRRRD RINAQLATLR KLIPKSEKMD KAALLGSVVE 120 HVKEMKSKTT EISNCMMIPT DVDEVTVDYV DDEYCSSIAK DRKILLKACV CCDDRPEFFS 180 ELNRALKSLR LTTVEANVIS LGGRIKSSFI LCPISSSVEG GICGNTLKQS LKLVLSRIAA 240 SCTTSTGSNY RIKSRRQRFF LPSH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G40200.1 | 1e-32 | bHLH family protein |