PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027110493.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 356aa MW: 41306.4 Da PI: 6.1924

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027110493.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179	1.2e-55	7	136	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv++yL+kk++ ++++l +vik+vd+yk+ePwdL++ ++ +ee+ ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk++ XP_027110493.1 7 VPPGFRFHPTDEELVDYYLRKKINCRRIDL-DVIKDVDLYKIEPWDLQElcRIGTEEQsEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAI 100 69**************************.9***********954555554445******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 +s k+ l+g++ktLvfykgrap+g+k+dW+mheyrle XP_027110493.1 101 YS-KHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136 .8899****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MNTFTHVPPG FRFHPTDEEL VDYYLRKKIN CRRIDLDVIK DVDLYKIEPW DLQELCRIGT 60 EEQSEWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKAI YSKHDLIGMR KTLVFYKGRA 120 PNGQKSDWIM HEYRLETEEN GTPQEEGWVV CRVFKKRIAT MRKVSEYESP IWYDDQVSFM 180 AEMDSPKQHS QSNLTYQYPY SCKKETNLHY QIPPDHFLQL PLLESPKLLP APASMACNSL 240 PTYGINMTHA SALQSSALTH EHMNQSQDQG LHSVYSNDLN NEQAMDQVTD WRVLDKFVAS 300 QLSQEEVSKE NDCSNATNAF PTSDNSNLML RHLEKQEMAP EMASTSSSSC QIELWK

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MNTFTHVPPG FRFHPTDEEL VDYYLRKKIN CRRIDLDVIK DVDLYKIEPW DLQELCRIGT  60
EEQSEWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKAI YSKHDLIGMR KTLVFYKGRA  120
PNGQKSDWIM HEYRLETEEN GTPQEEGWVV CRVFKKRIAT MRKVSEYESP IWYDDQVSFM  180
AEMDSPKQHS QSNLTYQYPY SCKKETNLHY QIPPDHFLQL PLLESPKLLP APASMACNSL  240
PTYGINMTHA SALQSSALTH EHMNQSQDQG LHSVYSNDLN NEQAMDQVTD WRVLDKFVAS  300
QLSQEEVSKE NDCSNATNAF PTSDNSNLML RHLEKQEMAP EMASTSSSSC QIELWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-136	NAC family protein