PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027110351.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

HSF

Protein Properties

Length: 346aa MW: 37719 Da PI: 5.0357

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027110351.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.3	7.8e-36	31	121	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d++++++isw+e+g++f+v++++efa+++LpkyFkh+nf+SFvRQLn+YgF+kv ++ weF+++ F++g+k ll++ XP_027110351.1 31 FLTKTYQLVDDRTIDDVISWNEDGSAFIVWNPTEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFSNDCFRRGEKGLLCD 116 9***************************************************************99.........************** PP XXXXX CS HSF_DNA-bind 97 ikrkk 101 i+r+k XP_027110351.1 117 IQRRK 121 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MAPPPVERNG GESTTTPPPP GDAPRSLPTP FLTKTYQLVD DRTIDDVISW NEDGSAFIVW 60 NPTEFARDLL PKYFKHNNFS SFVRQLNTYG FRKVVPDRWE FSNDCFRRGE KGLLCDIQRR 120 KLAAPPVAGA IISPVAVPTA AAAVSAIPPP RTVSPTDSGE EQVVSSTSSP SGFRETATAG 180 GSTAELIGEN ERLRKENMQL NKELSHMKSM CSNVYVLMSN YSNHSNGATA NSKAEGSSSQ 240 ALKALDLLPP KPIFDESGAT TECGEEDRMA VDEAGARIFG VSIGVKRGRE NGEAAAAEHD 300 KELQLQQPGT ADVKSEPIDD ENSNGDDQQT HWLRQCRIQN QRCVIK

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MAPPPVERNG GESTTTPPPP GDAPRSLPTP FLTKTYQLVD DRTIDDVISW NEDGSAFIVW  60
NPTEFARDLL PKYFKHNNFS SFVRQLNTYG FRKVVPDRWE FSNDCFRRGE KGLLCDIQRR  120
KLAAPPVAGA IISPVAVPTA AAAVSAIPPP RTVSPTDSGE EQVVSSTSSP SGFRETATAG  180
GSTAELIGEN ERLRKENMQL NKELSHMKSM CSNVYVLMSN YSNHSNGATA NSKAEGSSSQ  240
ALKALDLLPP KPIFDESGAT TECGEEDRMA VDEAGARIFG VSIGVKRGRE NGEAAAAEHD  300
KELQLQQPGT ADVKSEPIDD ENSNGDDQQT HWLRQCRIQN QRCVIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62020.1	3e-85	HSF family protein