PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027110199.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | WRKY | ||||||||
Protein Properties | Length: 390aa MW: 42542 Da PI: 4.6558 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 89.9 | 2e-28 | 185 | 243 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYGqK++k+s++pr+YYrC+++ gC+++k+ver+ dp++ ++ Y+geH h+ XP_027110199.1 185 ADSWAWRKYGQKPIKDSPYPRNYYRCSTSkGCTARKQVERCPADPSMYVVSYSGEHSHP 243 69************************9988****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 390 aa Download sequence |
MADDWDLYAV VRSCFNAAAA STASSSTTTD AAIAPVENSS LPSGETPSSS SFLASPSFQS 60 GHTSSDFPGF ANHTRDSFRG LQEIYKEPYE DIVQSFVDLN SQAQHIQAIQ GPGCTADQTP 120 QQQRIYGQPQ QLMQQPQRYS HLSREMFVGS SLSFPSTSPQ PERPRRRKNQ QAKRIQQMTQ 180 EELSADSWAW RKYGQKPIKD SPYPRNYYRC STSKGCTARK QVERCPADPS MYVVSYSGEH 240 SHPRPTHRSS LAGTTRSKVP PAAAARRPTT TTATTTSTTN IHNIASSSIA SCSSSSPASA 300 SSFSPTATPI TEGDSGVDEN VDQETADNEN NNSCGAELLF SGEEELEGWA DDGDDDDEND 360 GDGNGDDDIL IPNYALVNDD RFFKGLHFKD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 164 | 168 | PRRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52830.1 | 3e-45 | WRKY family protein |