PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027110199.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 390aa    MW: 42542 Da    PI: 4.6558
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027110199.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY89.92e-28185243259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      D ++WrKYGqK++k+s++pr+YYrC+++ gC+++k+ver+  dp++ ++ Y+geH h+
  XP_027110199.1 185 ADSWAWRKYGQKPIKDSPYPRNYYRCSTSkGCTARKQVERCPADPSMYVVSYSGEHSHP 243
                     69************************9988****************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    
MADDWDLYAV VRSCFNAAAA STASSSTTTD AAIAPVENSS LPSGETPSSS SFLASPSFQS  60
GHTSSDFPGF ANHTRDSFRG LQEIYKEPYE DIVQSFVDLN SQAQHIQAIQ GPGCTADQTP  120
QQQRIYGQPQ QLMQQPQRYS HLSREMFVGS SLSFPSTSPQ PERPRRRKNQ QAKRIQQMTQ  180
EELSADSWAW RKYGQKPIKD SPYPRNYYRC STSKGCTARK QVERCPADPS MYVVSYSGEH  240
SHPRPTHRSS LAGTTRSKVP PAAAARRPTT TTATTTSTTN IHNIASSSIA SCSSSSPASA  300
SSFSPTATPI TEGDSGVDEN VDQETADNEN NNSCGAELLF SGEEELEGWA DDGDDDDEND  360
GDGNGDDDIL IPNYALVNDD RFFKGLHFKD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1164168PRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.13e-45WRKY family protein