PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027110017.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Dof

Protein Properties

Length: 300aa MW: 32662.3 Da PI: 8.5452

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027110017.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.3	9.5e-40	26	87	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 ke+al+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss XP_027110017.1 26 KEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGTLRNVPVGGGSRKNKRSSS 87 7899******************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MGIGLAKPIE TPKPAAALEK KPRPQKEQAL NCPRCNSTNT KFCYYNNYSL TQPRYFCKTC 60 RRYWTEGGTL RNVPVGGGSR KNKRSSSSTT SVSALPPASS SENKKLPDLS HLTSTAPGFS 120 QNPKTPEGQD LNLTYPPVRN YSASLSGLMQ LPNFNENKNL DPHLGNISSS ISHVPAAGLE 180 FLKSTSGIST GGFSSLLSMP LSDSNAIYSS SQQLPMQEFK PKLSFSLDGF DNNGTDYGSL 240 HGVQVAENNN SSRLFLPYEE LKPLSSVTCD QYNEHQQNRG QEGESAPNGY WSGMLGGDSW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24060.1	2e-52	Dof family protein