PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027109752.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 293aa    MW: 31799.7 Da    PI: 7.1803
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027109752.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.33.8e-2998158259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqK++ +s+fprsY+rCt++   +Cp+kk v+r ++dp+++e+tY+g+H+++
  XP_027109752.1  98 EDGYTWRKYGQKDILNSRFPRSYFRCTHQklyQCPAKKLVQRLDDDPNIFEVTYRGDHTCH 158
                     7****************************9999**************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MDLLRAQQLL PDDTKLKGAI GGGLDEMVVD QMGGGGRCGG RHSLERAREI EPPAVEAASS  60
GGGRASSSQR QRKRDGGVER RVERVPAPQM GNTEIPPEDG YTWRKYGQKD ILNSRFPRSY  120
FRCTHQKLYQ CPAKKLVQRL DDDPNIFEVT YRGDHTCHLS STAPSVPPPL PVERREAHSM  180
MQQATAAAIH SLPNPTTNTT LSMSQWLTIS DFGLAVAGGG VVGSTSSTVN MAAVRVVAQQ  240
PVHPPPGYGR DVDYPVADMA DVMFNSGSSS STSMDLIFSS MDDKWPDSAD KKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.14e-38WRKY family protein