PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027109724.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 215aa MW: 24478 Da PI: 6.5127 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 37 | 6.1e-12 | 100 | 150 | 1 | 53 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIks 53 +r+ah +Er RR+++ + ++ Lr llP ++K s ++ + +Av+YI + XP_027109724.1 100 KRAAHRDVERLRRQEMANLYASLRNLLPLeY---IKGKRSMSDQVHQAVNYITH 150 79***************************77...******************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MDDFTSSLIP LQQDDDDSQL FPYDLTVPTI HPYLDDTIHH QDLGNQAASS LAPHQQQHYD 60 QVTSIDDDDN NNHHPRGRQR KKPSSAIPAD NNDPDDSKQK RAAHRDVERL RRQEMANLYA 120 SLRNLLPLEY IKGKRSMSDQ VHQAVNYITH KEKNIRELKV KRDKLRNLMG GSSDLNVKSV 180 EETNSSSTTF TVKQCESGGI EILMKNDLAG QSYGR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 100 | 112 | KRAAHRDVERLRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51780.1 | 3e-28 | bHLH family protein |