PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027109494.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family GATA
Protein Properties Length: 212aa    MW: 23431.3 Da    PI: 5.0869
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027109494.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA40.15.2e-13937735
            GATA  7 tkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                    ++TplWR+gp  ++ LCnaCG ++r +g+
  XP_027109494.1  9 IETPLWRSGPPEKPVLCNACGSRWRTRGT 37
                    79********88888**********9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MSENAINGIE TPLWRSGPPE KPVLCNACGS RWRTRGTLED YIPKHAIKDP ENDHSGKLPS  60
KLNQISSSSC HSHEQPPILE SNIAGQELLL PVLGDGTGNG ESTPIGATLS DNFTRVQTIE  120
EAVEFPLWDG NNVFKRKRSI LDQHIMSPTE MLHQQLYYAL QDSQAAAGDY CNGEEVLIFE  180
RINHYIPENE IGLGCISLKP PASPTKNFKP QS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.18e-20GATA family protein