PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027109317.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | GRAS | ||||||||
Protein Properties | Length: 748aa MW: 84200.5 Da PI: 6.3652 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 377.8 | 1.3e-115 | 374 | 745 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 l++lL++cA+ v+++d++ a++ L+++++++sp+gd+ qRla+ f+++L+arla++++e+y+al++++ s +e+l+a++++ ++P+ k+s XP_027109317.1 374 LRTLLISCAQSVANDDQRTAREQLKQIRQHSSPSGDACQRLASIFANGLEARLAGTGTEIYAALASKRIS---AAEKLKAYQVYLSACPFKKISI 465 6789************************************************************999999...9********************* PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188 + aN++I+ ++ ++++Hi+Df+i +G+QWp L+q L++Rp+gpp lRiTg+++p++g +e++eetg+rLa+++e+++vpfe+++++++++e+ XP_027109317.1 466 FFANKMIVHKASDAKTLHIVDFGILYGFQWPILIQHLSTRPGGPPXLRITGIERPQPGfrPSERVEETGRRLARYCERFHVPFEYQAIAEQNWEA 560 ***************************************************************************************9999**** PP GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283 +++e+L++ +gE+laVn +q +l+de+v+++s+rd+vL+l+++++P+++v + + +++++ F++rf eal +ys+lfd ++a+lpre+ +r+ XP_027109317.1 561 IKVEDLNIAEGEVLAVNALFQFNNLFDETVKVDSPRDAVLRLIRKMNPDIFVNAVTNGSYSAPFFVTRFREALFHYSSLFDIFDATLPREDLQRM 655 *********************************************************************************************** PP GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373 ++E++++gre+ n++acegaer+ r et+++W+ r ++aGFkp+pl+++ ++ + ++ + + + +e+ ++++gWk+r L+s S+W XP_027109317.1 656 NLEQQFFGREAINIIACEGAERVVRPETYKQWQVRHTRAGFKPLPLNQELLEKLRGKVKGGYHKDFVFDEDGSWMLQGWKGRILYSSSCW 745 ************************************************************99888************************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 748 aa Download sequence |
MDPRFNQLPD SVNGFKFEDE IVLPSFEESP NLLNGFKFGD NALDLNFVDT SSFSPTPGTG 60 NLPAFSTGSS EVDSPDDGDS DPVLRYLNQI LWKRTWRRSP ACSLILWLYE LLRNPYMMHL 120 ARSILHLRTR LTKTQRARTA CLEARASIVQ TAAVSASSSV EPGEYKSAAG QSYSLDYSFP 180 LSSENSSNLL FNSVSSFGNH MNGQLNSLAY NNPIPNIFSD SESISQFKKG MEEASKFLPS 240 GNQLIIDLDK YALPPKSEEI FLESKVKEEK DDGDHSPNGS RGRKHLHRQE SDIEQQRSSK 300 QSAVYDEEAV YDEEAELSEM FDRVLLCTDI KWCCAAQLHD EANKTGQQNG LPDGTGGGKT 360 RSRNQGSKSE AVDLRTLLIS CAQSVANDDQ RTAREQLKQI RQHSSPSGDA CQRLASIFAN 420 GLEARLAGTG TEIYAALASK RISAAEKLKA YQVYLSACPF KKISIFFANK MIVHKASDAK 480 TLHIVDFGIL YGFQWPILIQ HLSTRPGGPP XLRITGIERP QPGFRPSERV EETGRRLARY 540 CERFHVPFEY QAIAEQNWEA IKVEDLNIAE GEVLAVNALF QFNNLFDETV KVDSPRDAVL 600 RLIRKMNPDI FVNAVTNGSY SAPFFVTRFR EALFHYSSLF DIFDATLPRE DLQRMNLEQQ 660 FFGREAINII ACEGAERVVR PETYKQWQVR HTRAGFKPLP LNQELLEKLR GKVKGGYHKD 720 FVFDEDGSWM LQGWKGRILY SSSCWSPA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07530.1 | 0.0 | GRAS family protein |