PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027109317.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family GRAS
Protein Properties Length: 748aa    MW: 84200.5 Da    PI: 6.3652
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027109317.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS377.81.3e-1153747451373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA+ v+++d++ a++ L+++++++sp+gd+ qRla+ f+++L+arla++++e+y+al++++ s    +e+l+a++++  ++P+ k+s 
  XP_027109317.1 374 LRTLLISCAQSVANDDQRTAREQLKQIRQHSSPSGDACQRLASIFANGLEARLAGTGTEIYAALASKRIS---AAEKLKAYQVYLSACPFKKISI 465
                     6789************************************************************999999...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN++I+  ++ ++++Hi+Df+i +G+QWp L+q L++Rp+gpp lRiTg+++p++g   +e++eetg+rLa+++e+++vpfe+++++++++e+
  XP_027109317.1 466 FFANKMIVHKASDAKTLHIVDFGILYGFQWPILIQHLSTRPGGPPXLRITGIERPQPGfrPSERVEETGRRLARYCERFHVPFEYQAIAEQNWEA 560
                     ***************************************************************************************9999**** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++e+L++ +gE+laVn  +q  +l+de+v+++s+rd+vL+l+++++P+++v +  + +++++ F++rf eal +ys+lfd ++a+lpre+ +r+
  XP_027109317.1 561 IKVEDLNIAEGEVLAVNALFQFNNLFDETVKVDSPRDAVLRLIRKMNPDIFVNAVTNGSYSAPFFVTRFREALFHYSSLFDIFDATLPREDLQRM 655
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     ++E++++gre+ n++acegaer+ r et+++W+ r ++aGFkp+pl+++  ++ +  ++  + + +  +e+  ++++gWk+r L+s S+W
  XP_027109317.1 656 NLEQQFFGREAINIIACEGAERVVRPETYKQWQVRHTRAGFKPLPLNQELLEKLRGKVKGGYHKDFVFDEDGSWMLQGWKGRILYSSSCW 745
                     ************************************************************99888************************* PP

Sequence ? help Back to Top
Protein Sequence    Length: 748 aa     Download sequence    
MDPRFNQLPD SVNGFKFEDE IVLPSFEESP NLLNGFKFGD NALDLNFVDT SSFSPTPGTG  60
NLPAFSTGSS EVDSPDDGDS DPVLRYLNQI LWKRTWRRSP ACSLILWLYE LLRNPYMMHL  120
ARSILHLRTR LTKTQRARTA CLEARASIVQ TAAVSASSSV EPGEYKSAAG QSYSLDYSFP  180
LSSENSSNLL FNSVSSFGNH MNGQLNSLAY NNPIPNIFSD SESISQFKKG MEEASKFLPS  240
GNQLIIDLDK YALPPKSEEI FLESKVKEEK DDGDHSPNGS RGRKHLHRQE SDIEQQRSSK  300
QSAVYDEEAV YDEEAELSEM FDRVLLCTDI KWCCAAQLHD EANKTGQQNG LPDGTGGGKT  360
RSRNQGSKSE AVDLRTLLIS CAQSVANDDQ RTAREQLKQI RQHSSPSGDA CQRLASIFAN  420
GLEARLAGTG TEIYAALASK RISAAEKLKA YQVYLSACPF KKISIFFANK MIVHKASDAK  480
TLHIVDFGIL YGFQWPILIQ HLSTRPGGPP XLRITGIERP QPGFRPSERV EETGRRLARY  540
CERFHVPFEY QAIAEQNWEA IKVEDLNIAE GEVLAVNALF QFNNLFDETV KVDSPRDAVL  600
RLIRKMNPDI FVNAVTNGSY SAPFFVTRFR EALFHYSSLF DIFDATLPRE DLQRMNLEQQ  660
FFGREAINII ACEGAERVVR PETYKQWQVR HTRAGFKPLP LNQELLEKLR GKVKGGYHKD  720
FVFDEDGSWM LQGWKGRILY SSSCWSPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein