PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027108522.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 367aa    MW: 40777.3 Da    PI: 5.077
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027108522.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.11.8e-28133193158
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                     +dDg++WrKYGqK++ g++fpr+YYrCt++   gC ++k+v+rs+edp v+e+tY g+H +
  XP_027108522.1 133 VDDGHSWRKYGQKDILGANFPRAYYRCTHRnsrGCLATKQVQRSDEDPAVFEVTYIGRHSC 193
                     59***************************98899*************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
MEKVNPSDQK NLIIELSQGR EMANELRKQL DPVTSPATCE ALVEKIVSTY DKALAMLTWR  60
VLKEVETLPE TGRKESPPFH SPVLTTPITE GSNSSGFSKD QECNKDASRK RKTLPKWSDN  120
VRVCSASGLE GHVDDGHSWR KYGQKDILGA NFPRAYYRCT HRNSRGCLAT KQVQRSDEDP  180
AVFEVTYIGR HSCIQAANSG SAIRSDGKEM RKPKKARSLE RGGGNQLGAE QTPQHLGQGL  240
KVETEVSKTK EEIFRSFSFS FKGVESDILE SQFFSDVMKD CDMMGGSSPT FLSPTTSESN  300
YFSSSCQMDN NFGIDNILQT SESDLTDMIS TPTSVISSSP FGDHDFSIDQ VDFDTSFTLD  360
DDLAYFN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1108113SRKRKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.12e-42WRKY family protein