PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027108522.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | WRKY | ||||||||
Protein Properties | Length: 367aa MW: 40777.3 Da PI: 5.077 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 90.1 | 1.8e-28 | 133 | 193 | 1 | 58 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 +dDg++WrKYGqK++ g++fpr+YYrCt++ gC ++k+v+rs+edp v+e+tY g+H + XP_027108522.1 133 VDDGHSWRKYGQKDILGANFPRAYYRCTHRnsrGCLATKQVQRSDEDPAVFEVTYIGRHSC 193 59***************************98899*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 367 aa Download sequence |
MEKVNPSDQK NLIIELSQGR EMANELRKQL DPVTSPATCE ALVEKIVSTY DKALAMLTWR 60 VLKEVETLPE TGRKESPPFH SPVLTTPITE GSNSSGFSKD QECNKDASRK RKTLPKWSDN 120 VRVCSASGLE GHVDDGHSWR KYGQKDILGA NFPRAYYRCT HRNSRGCLAT KQVQRSDEDP 180 AVFEVTYIGR HSCIQAANSG SAIRSDGKEM RKPKKARSLE RGGGNQLGAE QTPQHLGQGL 240 KVETEVSKTK EEIFRSFSFS FKGVESDILE SQFFSDVMKD CDMMGGSSPT FLSPTTSESN 300 YFSSSCQMDN NFGIDNILQT SESDLTDMIS TPTSVISSSP FGDHDFSIDQ VDFDTSFTLD 360 DDLAYFN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 108 | 113 | SRKRKT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11070.1 | 2e-42 | WRKY family protein |