PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027108494.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bZIP

Protein Properties

Length: 418aa MW: 44495.4 Da PI: 9.3162

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027108494.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	65.8	7.7e-21	275	337	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv++L+aeN +Lk+e+ +l++ +++lk e+ XP_027108494.1 275 ERELKRERRKQSNRESARRSRLRKQAETEELAKKVQSLTAENLSLKSEIHKLTESSERLKLEN 337 89**********************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MGNSDEAKSS KPEKSSSPAP DQANVHVYPD WAAMQAYYGP RVAVPPYFNS AVASGHPPHP 60 YMWGPAQPMM SPYGTPYAAI YPHGGVYAHP GVPLGSHANG HGVLPSPTVT EATAAVPLSL 120 DTPVKSSANT DKGFTNKLKG FDGLAMSIGN GSSDRAGAGS DHGISQSEDT EGSSDGSNGN 180 TTKVGQNNKK RSREGTPSDA AGEGKNLTPK SPIRTGEVNG TSAKVMGMTV ATANEVEKVM 240 GSVLSPNMTS TLELRNPSGG NMKTSPVSEA WLQNERELKR ERRKQSNRES ARRSRLRKQA 300 ETEELAKKVQ SLTAENLSLK SEIHKLTESS ERLKLENATM MEKLKNPQLG QTGNLSLSKF 360 DEMRLQPVGT ANLLARVNNS GSVDRNDEEG EVFENTKSGA KLRQLLDANP RTDAVAAG

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MGNSDEAKSS KPEKSSSPAP DQANVHVYPD WAAMQAYYGP RVAVPPYFNS AVASGHPPHP  60
YMWGPAQPMM SPYGTPYAAI YPHGGVYAHP GVPLGSHANG HGVLPSPTVT EATAAVPLSL  120
DTPVKSSANT DKGFTNKLKG FDGLAMSIGN GSSDRAGAGS DHGISQSEDT EGSSDGSNGN  180
TTKVGQNNKK RSREGTPSDA AGEGKNLTPK SPIRTGEVNG TSAKVMGMTV ATANEVEKVM  240
GSVLSPNMTS TLELRNPSGG NMKTSPVSEA WLQNERELKR ERRKQSNRES ARRSRLRKQA  300
ETEELAKKVQ SLTAENLSLK SEIHKLTESS ERLKLENATM MEKLKNPQLG QTGNLSLSKF  360
DEMRLQPVGT ANLLARVNNS GSVDRNDEEG EVFENTKSGA KLRQLLDANP RTDAVAAG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	292	298	RRSRLRK
2	292	299	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.1	1e-120	bZIP family protein