PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027108493.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bZIP

Protein Properties

Length: 419aa MW: 45439.3 Da PI: 9.8948

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027108493.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	65.8	7.7e-21	276	338	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv++L+aeN +Lk+e+ +l++ +++lk e+ XP_027108493.1 276 ERELKRERRKQSNRESARRSRLRKQAETEELAKKVQSLTAENLSLKSEIHKLTESSERLKLEN 338 89**********************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MRRSHPSLRN LLHQHQTRQM FMYILIGLQC RHTMVLELLY HHILIQLLHL VTPLILTCGV 60 QHSHLLFQPM MSPYGTPYAA IYPHGGVYAH PGVPLGSHAN GHGVLPSPTV TEATAAVPLS 120 LDTPVKSSAN TDKGFTNKLK GFDGLAMSIG NGSSDRAGAG SDHGISQSED TEGSSDGSNG 180 NTTKVGQNNK KRSREGTPSD AAGEGKNLTP KSPIRTGEVN GTSAKVMGMT VATANEVEKV 240 MGSVLSPNMT STLELRNPSG GNMKTSPVSE AWLQNERELK RERRKQSNRE SARRSRLRKQ 300 AETEELAKKV QSLTAENLSL KSEIHKLTES SERLKLENAT MMEKLKNPQL GQTGNLSLSK 360 FDEMRLQPVG TANLLARVNN SGSVDRNDEE GEVFENTKSG AKLRQLLDAN PRTDAVAAG

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MRRSHPSLRN LLHQHQTRQM FMYILIGLQC RHTMVLELLY HHILIQLLHL VTPLILTCGV  60
QHSHLLFQPM MSPYGTPYAA IYPHGGVYAH PGVPLGSHAN GHGVLPSPTV TEATAAVPLS  120
LDTPVKSSAN TDKGFTNKLK GFDGLAMSIG NGSSDRAGAG SDHGISQSED TEGSSDGSNG  180
NTTKVGQNNK KRSREGTPSD AAGEGKNLTP KSPIRTGEVN GTSAKVMGMT VATANEVEKV  240
MGSVLSPNMT STLELRNPSG GNMKTSPVSE AWLQNERELK RERRKQSNRE SARRSRLRKQ  300
AETEELAKKV QSLTAENLSL KSEIHKLTES SERLKLENAT MMEKLKNPQL GQTGNLSLSK  360
FDEMRLQPVG TANLLARVNN SGSVDRNDEE GEVFENTKSG AKLRQLLDAN PRTDAVAAG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	293	299	RRSRLRK
2	293	300	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.1	3e-87	bZIP family protein