PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027108046.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 371aa    MW: 41818.4 Da    PI: 8.4359
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027108046.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1561.6e-48381632128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                     ppG+rF P+deel+v+yL++kv++++l++  v+ e+++y+++PwdLpkk+  +e+ewyfFs+rd+ky++g r+nr+++sgyWkatg+dk++ls +
  XP_027108046.1  38 PPGVRFYPSDEELIVYYLHNKVNSRPLPA-AVVGEIELYSYNPWDLPKKALFGEEEWYFFSPRDRKYPNGARPNRTAASGYWKATGTDKPILSCS 131
                     9****************************.89***************8888899***************************************** PP

             NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                     g+ +g+kk Lvfy g+ p+g+ktdW+m eyrl
  XP_027108046.1 132 GARIGVKKALVFYIGKPPNGVKTDWIMIEYRL 163
                     ******************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    
MYTSPLFVLC SQPADHQANR IQGLVPMETQ PISSFQFPPG VRFYPSDEEL IVYYLHNKVN  60
SRPLPAAVVG EIELYSYNPW DLPKKALFGE EEWYFFSPRD RKYPNGARPN RTAASGYWKA  120
TGTDKPILSC SGARIGVKKA LVFYIGKPPN GVKTDWIMIE YRLPDTHKRP SRSTGSMRLD  180
DWVLCRIRQK GNMSKNSWEV PHSPIKVTED TPNLKELHSA YAAKNALDIC SSYFLSKDCH  240
LLAKLLATQD LPRFETNTRA TSCSSNISQN CKTVYEHGTI EENQVTNSFF PSSLNQQGKP  300
IEEIGYGNIP PSEKAMTNLN KNEFFLAGNV NGASFYNQQQ SHGDMFKLNL SSAMMTLQEL  360
DVSAFAAKFL P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.12e-75NAC family protein