PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027108046.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NAC | ||||||||
Protein Properties | Length: 371aa MW: 41818.4 Da PI: 8.4359 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 156 | 1.6e-48 | 38 | 163 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 ppG+rF P+deel+v+yL++kv++++l++ v+ e+++y+++PwdLpkk+ +e+ewyfFs+rd+ky++g r+nr+++sgyWkatg+dk++ls + XP_027108046.1 38 PPGVRFYPSDEELIVYYLHNKVNSRPLPA-AVVGEIELYSYNPWDLPKKALFGEEEWYFFSPRDRKYPNGARPNRTAASGYWKATGTDKPILSCS 131 9****************************.89***************8888899***************************************** PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 g+ +g+kk Lvfy g+ p+g+ktdW+m eyrl XP_027108046.1 132 GARIGVKKALVFYIGKPPNGVKTDWIMIEYRL 163 ******************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 371 aa Download sequence |
MYTSPLFVLC SQPADHQANR IQGLVPMETQ PISSFQFPPG VRFYPSDEEL IVYYLHNKVN 60 SRPLPAAVVG EIELYSYNPW DLPKKALFGE EEWYFFSPRD RKYPNGARPN RTAASGYWKA 120 TGTDKPILSC SGARIGVKKA LVFYIGKPPN GVKTDWIMIE YRLPDTHKRP SRSTGSMRLD 180 DWVLCRIRQK GNMSKNSWEV PHSPIKVTED TPNLKELHSA YAAKNALDIC SSYFLSKDCH 240 LLAKLLATQD LPRFETNTRA TSCSSNISQN CKTVYEHGTI EENQVTNSFF PSSLNQQGKP 300 IEEIGYGNIP PSEKAMTNLN KNEFFLAGNV NGASFYNQQQ SHGDMFKLNL SSAMMTLQEL 360 DVSAFAAKFL P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61110.1 | 2e-75 | NAC family protein |