PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027107755.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bHLH

Protein Properties

Length: 323aa MW: 36106.8 Da PI: 4.8511

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027107755.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	18.9	2.7e-06	165	192	5	35
HHHHHHHHHHHHHHHHHHHHCTSCCC...TT CS HLH 5 hnerErrRRdriNsafeeLrellPkaskaps 35 h +Er+RR+++ ++f L +l+P + ++ XP_027107755.1 165 HIVAERKRREQLSQRFVALSTLVPGL---KK 192 8899********************98...33 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MDNPVSSSWF SELGMEDSFF NDQYDVMDFL DEEFLNANLS PEGNTNSSTF IPISTCSTTL 60 SAFSTMDAPP ISTERPAKQQ KSDDLNSSSL GNIPNHHNQP MILTFGNPVM PAEINPQQIN 120 LEDDAVSEIL KSHGSFVNLE EATRSSQKRK KTGGRTRPAS QTYDHIVAER KRREQLSQRF 180 VALSTLVPGL KKERVKTLEE QAAKQNMESM VLVKRSQLLV EDEGSSDEMG GSDEQPLPEI 240 EAKLCNKNIL LRVHCRNYRG VLVKILSEVE MLNLTLIHTS VAPFGRLALD VTLMAEMEKE 300 FNLTMQELVK SLQSALQRGK QGD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	169	174	ERKRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	1e-42	bHLH family protein