PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027106868.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NF-YA | ||||||||
Protein Properties | Length: 303aa MW: 33546.1 Da PI: 9.5132 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 104.2 | 1.1e-32 | 142 | 198 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq+Rak+e ekk+ k+rkpylheSRh+hA+rR+RgsgGrF XP_027106868.1 142 EEPVYVNAKQYHGILRRRQSRAKAEMEKKI-MKGRKPYLHESRHQHAMRRARGSGGRF 198 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence |
MPTIARNEGR QLETEVHNIT SSRVYTQPWW RGYESTCLPS PGESVNGSVS ESVTKERDTS 60 VAPPSESNGS GGQGPQQVKH APSTIPMSGH LDSPSQMELV GHSIMLTPYP YPDPAYGGVI 120 TYGAPYFGIH QTRMPLPLQM EEEPVYVNAK QYHGILRRRQ SRAKAEMEKK IMKGRKPYLH 180 ESRHQHAMRR ARGSGGRFLN TKKLENNESR SSKSASKEQT KCGDAVPTQS GNSSGSEHLS 240 TDCNGYSDQL REKEQMLSNG NGRGISSFYY QQSSGSERGR QHFNQESWSL LVNQAPRGAA 300 SSN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12840.2 | 3e-46 | NF-YA family protein |