PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027106866.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NF-YA | ||||||||
Protein Properties | Length: 307aa MW: 34007.6 Da PI: 9.5134 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 104.2 | 1.2e-32 | 146 | 202 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq+Rak+e ekk+ k+rkpylheSRh+hA+rR+RgsgGrF XP_027106866.1 146 EEPVYVNAKQYHGILRRRQSRAKAEMEKKI-MKGRKPYLHESRHQHAMRRARGSGGRF 202 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence |
MPTIARNEGR QLETEVHNIT SSRVYTQPWW RGYESTCLPS PGESVNGSVS ESVTKERDTS 60 VAPPSESNGS GGQGPQQVKH APSTIPMSGH LDSPSQMELV GHSIMLTPYP YPDPAYGGVI 120 TYGAPVHPQY FGIHQTRMPL PLQMEEEPVY VNAKQYHGIL RRRQSRAKAE MEKKIMKGRK 180 PYLHESRHQH AMRRARGSGG RFLNTKKLEN NESRSSKSAS KEQTKCGDAV PTQSGNSSGS 240 EHLSTDCNGY SDQLREKEQM LSNGNGRGIS SFYYQQSSGS ERGRQHFNQE SWSLLVNQAP 300 RGAASSN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12840.1 | 2e-45 | NF-YA family protein |