PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027106177.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | GATA | ||||||||
Protein Properties | Length: 366aa MW: 40298.7 Da PI: 5.2207 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 48.4 | 1.2e-15 | 206 | 242 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg+++ Tp +Rrgp g++tLCnaCGl+++ kg+ XP_027106177.1 206 CQHCGVSEksTPAMRRGPGGPRTLCNACGLMWANKGT 242 **********************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 366 aa Download sequence |
MASTMNGRRR HKRPYKDRYV NVPFQVDEDG SAGGFDADDI GAVDERINSG AREMRAVNSM 60 PIATILTSPG GAPMASRTSE LTISFEGEVY VFPAVPPEKV QAVLLLLGGR DVPRSIRSSE 120 FLLQQNYDGS SQPNVSRRIA SLVRFREKRK ERCFEKKIRY TCRKEVAQRM HRKNGQFASL 180 KDAGKAAENW ESGEVTPHQE HVSRRCQHCG VSEKSTPAMR RGPGGPRTLC NACGLMWANK 240 GTLRDLTKGG RSAYFDQSDP ETPEMKASSM EPENSYHNQD EEGSSEDAKP MFVESGCPSL 300 GPNAQDLLET AQGLSGDSPV GLGNSSINLD EQQETLDELA NASGTEFEIP SNFDEQVWLS 360 SNADLE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21175.2 | 6e-54 | GATA family protein |