PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027106175.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | GATA | ||||||||
Protein Properties | Length: 367aa MW: 40328.8 Da PI: 5.2264 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 48.4 | 1.2e-15 | 208 | 244 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg+++ Tp +Rrgp g++tLCnaCGl+++ kg+ XP_027106175.1 208 CQHCGVSEksTPAMRRGPGGPRTLCNACGLMWANKGT 244 **********************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 367 aa Download sequence |
MASTMNGRRR HKRPYKDRYV NVPFQVDEDG SAGGFDADDI GAVDERINSG AREMRAVNSM 60 PIATILTSPG GAPMASRTSE LTISFEGEVY VFPAVPPEKA VLLLLGGRDV PRSIRSSEFL 120 LQQNCKTTDD GSSQPNVSRR IASLVRFREK RKERCFEKKI RYTCRKEVAQ RMHRKNGQFA 180 SLKDAGKAAE NWESGEVTPH QEHVSRRCQH CGVSEKSTPA MRRGPGGPRT LCNACGLMWA 240 NKGTLRDLTK GGRSAYFDQS DPETPEMKAS SMEPENSYHN QDEEGSSEDA KPMFVESGCP 300 SLGPNAQDLL ETAQGLSGDS PVGLGNSSIN LDEQETLDEL ANASGTEFEI PSNFDEQVWL 360 SSNADLE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21175.2 | 8e-51 | GATA family protein |