PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027105982.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NF-YB | ||||||||
Protein Properties | Length: 169aa MW: 18933.7 Da PI: 4.5767 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 42.1 | 2.1e-13 | 32 | 124 | 7 | 94 |
NF-YB 7 flPianvsrimkkvlP...anakis..kdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 +lP + v r++k l a++ i+ ++a + e fi ++t+ a+d c++ +r+ in++d+l al ++ f ++v+pl++ l+++r+ + XP_027105982.1 32 ELPKTIVRRLVKDKLSqlsAESEITvfREALQAFSESGRIFIHYLTATANDICKESNRQIINAEDVLKALEEIDFPEFVQPLRASLEEFRQRN 124 57888889999976541115555543379999999*******************************************************865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence |
MAEKEKEKEK AKAKENGEVT TVTESAAGEL EELPKTIVRR LVKDKLSQLS AESEITVFRE 60 ALQAFSESGR IFIHYLTATA NDICKESNRQ IINAEDVLKA LEEIDFPEFV QPLRASLEEF 120 RQRNAGKRSG SXKAKEADRK GKRKEPPTAE VEDEQDATKS DESEDGADD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27470.1 | 4e-37 | NF-YB family protein |