PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027105753.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | MYB_related | ||||||||
Protein Properties | Length: 85aa MW: 9319.3 Da PI: 9.4883 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 29.7 | 1.4e-09 | 15 | 59 | 2 | 44 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 g+WT + + +a + + ++ +W+++ar +g g+t+ ++k ++ XP_027105753.1 15 GSWTVTQNKAFEKALAVYDKDtpdRWSKVARAVG-GKTPDEVKRHY 59 89********************************.**********9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 85 aa Download sequence |
MASSSISSRS SSSSGSWTVT QNKAFEKALA VYDKDTPDRW SKVARAVGGK TPDEVKRHYE 60 ILVEDIKQIE GGHVPYPNYR TTASG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39250.1 | 5e-35 | MYB_related family protein |