PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027105614.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

HSF

Protein Properties

Length: 378aa MW: 43010.2 Da PI: 4.5582

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027105614.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.9	9.1e-35	13	104	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+ye+++d+ ++ ++sws n++sf+v+++ ef++++Lp+yFkh+nf+SF+RQLn+YgF+k++ e+ weF+++ F +g+ +ll++ XP_027105614.1 13 FLTKTYEMVDDPLTNAIVSWSCNNRSFIVWNPPEFSRDLLPQYFKHNNFSSFIRQLNTYGFRKIDPEQ---------WEFANDDFVRGQPHLLKN 98 9******************999************************************9998.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i r+k XP_027105614.1 99 IYRRKP 104 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MDEPCSSNVL PPFLTKTYEM VDDPLTNAIV SWSCNNRSFI VWNPPEFSRD LLPQYFKHNN 60 FSSFIRQLNT YGFRKIDPEQ WEFANDDFVR GQPHLLKNIY RRKPVHSHSG QGAVESQLSE 120 SERRRYKDDV ERLKSDKEAL LFELQRYKQE EQRFELQVLG TTESVQLMEQ KQKNMMSFLS 180 KILQRPILAL ELMPEPHIHE RKRRIPGNSY LNEDISMANT QINSQILQKE QLDASSLLAF 240 NKDLLEELDS TLSFWENILI NVGQACDRLT SSPALVESTS CAGSPVVSYT EPNTNDVSVG 300 PKISEIDMDC DQNTNIAVIN DTANSDELVA MNPTNVPTNG PTGVNDVFWE QFLTENPGST 360 NSSEVKVNIM IMAGFGGT

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MDEPCSSNVL PPFLTKTYEM VDDPLTNAIV SWSCNNRSFI VWNPPEFSRD LLPQYFKHNN  60
FSSFIRQLNT YGFRKIDPEQ WEFANDDFVR GQPHLLKNIY RRKPVHSHSG QGAVESQLSE  120
SERRRYKDDV ERLKSDKEAL LFELQRYKQE EQRFELQVLG TTESVQLMEQ KQKNMMSFLS  180
KILQRPILAL ELMPEPHIHE RKRRIPGNSY LNEDISMANT QINSQILQKE QLDASSLLAF  240
NKDLLEELDS TLSFWENILI NVGQACDRLT SSPALVESTS CAGSPVVSYT EPNTNDVSVG  300
PKISEIDMDC DQNTNIAVIN DTANSDELVA MNPTNVPTNG PTGVNDVFWE QFLTENPGST  360
NSSEVKVNIM IMAGFGGT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	4e-94	HSF family protein