PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027105043.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | MYB_related | ||||||||
Protein Properties | Length: 79aa MW: 9094.97 Da PI: 4.7079 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38 | 3.7e-12 | 26 | 67 | 2 | 45 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++eE++l+++ +++ G + W++Ia +++ gR+++++ +w+ XP_027105043.1 26 VEFSEEEEDLIIRMFNLVGER-WSLIAGRIP-GRSAEEIEKYWN 67 679******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 79 aa Download sequence |
MAEAEHSSDE TCTHNLPEKK SGDSKVEFSE EEEDLIIRMF NLVGERWSLI AGRIPGRSAE 60 EIEKYWNSRH PTSQCSRNN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46410.1 | 8e-20 | MYB_related family protein |