PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027104131.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 334aa    MW: 36688.1 Da    PI: 7.1658
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027104131.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY734e-23130191159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dg++WrKYGqKe+ ++++pr Y+rCt++   gC+++k+v+r +e+p v ++tY g+H+++
  XP_027104131.1 130 VEDGHAWRKYGQKEILNTTYPRCYFRCTHKhdqGCKATKQVQRIKEEPVVYQTTYFGHHTCS 191
                     58***************************99999**************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MDLPNPQQLR TIQETVIGKL LKGKESATQL VALLKKPRSS GDRGGSVSAE ELALQISRSF  60
SESISAFGSL EGNGICQIVA ADGVVRVSSV DRGSSKTSDN GRKRLGVKDR RGCYRRRNVA  120
QSSIIVSSTV EDGHAWRKYG QKEILNTTYP RCYFRCTHKH DQGCKATKQV QRIKEEPVVY  180
QTTYFGHHTC SDTLMRAPQI ISDTDPMDSC LLSFETKAPT KQNLLLLYPN RVMTTATATG  240
NQEFKDETQS DVSDNKSCLD SSTMLQNPTT NSETSGPRSS NVNGAYHEEV VSGMHSCSST  300
PLQGLDMEDF STKFDDLDDH LLFGDMAGLL PALS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-40WRKY family protein