PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027103943.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 356aa MW: 41216.3 Da PI: 6.0532

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027103943.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179	1.2e-55	7	136	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv++yL+kk++ ++++l +vik+vd+yk+ePwdL++ ++ +ee+ ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk++ XP_027103943.1 7 VPPGFRFHPTDEELVDYYLRKKINCRRIDL-DVIKDVDLYKIEPWDLQElcRIGTEEQsEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAI 100 69**************************.9***********954555554445******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 +s k+ l+g++ktLvfykgrap+g+k+dW+mheyrle XP_027103943.1 101 YS-KHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136 .8899****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MNTFTHVPPG FRFHPTDEEL VDYYLRKKIN CRRIDLDVIK DVDLYKIEPW DLQELCRIGT 60 EEQSEWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKAI YSKHDLIGMR KTLVFYKGRA 120 PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRIAT MRKVSEHESP IWYDDQVSFM 180 AEMDSPKQHS QSNLTYQYPY SCKKETNLHY QIPPDHFLQL PLLESPKLLP APASMACNSL 240 PTYGVNMTHA SALQSSALTL EHMNQSQDQG LHSVYSSDLN NEQAMDQVTD WRVLDKFVAS 300 QLSQEEVSKE NDCSNATNAF PTSDDSNLML RHLEKQEMVP EMASTSSSSC QIDLWK

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MNTFTHVPPG FRFHPTDEEL VDYYLRKKIN CRRIDLDVIK DVDLYKIEPW DLQELCRIGT  60
EEQSEWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKAI YSKHDLIGMR KTLVFYKGRA  120
PNGQKSDWIM HEYRLETDEN GTPQEEGWVV CRVFKKRIAT MRKVSEHESP IWYDDQVSFM  180
AEMDSPKQHS QSNLTYQYPY SCKKETNLHY QIPPDHFLQL PLLESPKLLP APASMACNSL  240
PTYGVNMTHA SALQSSALTL EHMNQSQDQG LHSVYSSDLN NEQAMDQVTD WRVLDKFVAS  300
QLSQEEVSKE NDCSNATNAF PTSDDSNLML RHLEKQEMVP EMASTSSSSC QIDLWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-135	NAC family protein