PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027103833.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

HSF

Protein Properties

Length: 346aa MW: 37648.9 Da PI: 5.2904

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027103833.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	114.8	5.6e-36	31	121	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d++++++isw+e+g++f+v++++efa+++LpkyFkh+nf+SFvRQLn+YgF+kv ++ weF+++ F++g+k ll++ XP_027103833.1 31 FLTKTYQLVDDRTIDDVISWNEDGSTFIVWNPTEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFSNDCFRRGEKGLLCD 116 9***************************************************************99.........************** PP XXXXX CS HSF_DNA-bind 97 ikrkk 101 i+r+k XP_027103833.1 117 IQRRK 121 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MAPPPVERNG GESTTTPPPP GDGPRSLPTP FLTKTYQLVD DRTIDDVISW NEDGSTFIVW 60 NPTEFARDLL PKYFKHNNFS SFVRQLNTYG FRKVVPDRWE FSNDCFRRGE KGLLCDIQRR 120 KLAAPPVAGA TISPVTVPTP AAAVSAIPPP RTVSPTDSGE EQVVSSTSSP SGFRETATAG 180 GSTAELIGEN ERLRKENMQL NKELSHMKSM CSNVYVLMSN YSNHSNGATA NSKAESSSSQ 240 ALKALDLLPP KPIFDESGAT TECGGEDRMA VDEAGARIFG VSIGVKRGRE NGAAAAAEHD 300 KELQLQQPGT ADVKSEPIDD ENSNGDDQQA HWLRQCRIQN QRCVIK

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MAPPPVERNG GESTTTPPPP GDGPRSLPTP FLTKTYQLVD DRTIDDVISW NEDGSTFIVW  60
NPTEFARDLL PKYFKHNNFS SFVRQLNTYG FRKVVPDRWE FSNDCFRRGE KGLLCDIQRR  120
KLAAPPVAGA TISPVTVPTP AAAVSAIPPP RTVSPTDSGE EQVVSSTSSP SGFRETATAG  180
GSTAELIGEN ERLRKENMQL NKELSHMKSM CSNVYVLMSN YSNHSNGATA NSKAESSSSQ  240
ALKALDLLPP KPIFDESGAT TECGGEDRMA VDEAGARIFG VSIGVKRGRE NGAAAAAEHD  300
KELQLQQPGT ADVKSEPIDD ENSNGDDQQA HWLRQCRIQN QRCVIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62020.1	2e-79	HSF family protein