PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027103677.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 392aa    MW: 42660.1 Da    PI: 4.6588
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027103677.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY89.92.1e-28185243259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      D ++WrKYGqK++k+s++pr+YYrC+++ gC+++k+ver+  dp++ ++ Y+geH h+
  XP_027103677.1 185 ADSWAWRKYGQKPIKDSPYPRNYYRCSTSkGCTARKQVERCPADPSMYVVSYSGEHSHP 243
                     69************************9988****************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    
MADDWDLYAV VRSCFNAAAT STASSSTTTD AAIAPVENSS LPSGETSLSA SFLASPSFQS  60
GHTSSDFPGF ANHTRDSFRG LEEIYKEPYE DIVQSFVDLN SHAQHIQAIQ GPGCTADQTP  120
QQQRIYGQPQ QLMQQPQRYS HLSREMFVGA SLSFPSTSPQ PERPRRRKNQ QAKRIQQMTQ  180
EELSADSWAW RKYGQKPIKD SPYPRNYYRC STSKGCTARK QVERCPADPS MYVVSYSGEH  240
SHPRPTHRSS LAGTTRSKVP PAAAAAARPP TTTTATTTST TNIHNIASSS IASCSSSSPA  300
SASSFSPTAT PITEGDSGVD ENVDQETADN ENNNSYGAEL LLSGEEEVEG WADDGDDDDE  360
NDGDGNGDDD ILIPNYALVN DDRFFKGLHF KN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1164168PRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.12e-45WRKY family protein