PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027103530.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family Dof
Protein Properties Length: 310aa    MW: 33857.5 Da    PI: 8.3399
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027103530.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.21e-393394263
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
                    ke+al+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss
  XP_027103530.1 33 KEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGTLRNVPVGGGSRKNKRSSS 94
                    7899******************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MDTTQWPQGI GLAKPIETPK PAAALEKKPR PQKEQALNCP RCNSTNTKFC YYNNYSLTQP  60
RYFCKTCRRY WTEGGTLRNV PVGGGSRKNK RSSSSTTSVS SLPPASSSEN KKLPDLSHLT  120
GTAPGFPQNP KTPEGQDLNL TYPPVRNYSA SLSGLMQLPN FNENKNLDPH LGNISSSISH  180
VPAAGLEFLK STSGISTGGF SSLLSMPLSD SNAIYSSSQQ LPMQEFKPKL SFSLDGFDNN  240
GTDYGSLHGV QVAENNNNNN SSRLFLPYEE LKPLSSVTCD QYNEHQQNRG QEGESAPNGY  300
WSGMLGGDSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24060.13e-55Dof family protein