PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027103361.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family TCP
Protein Properties Length: 410aa    MW: 43747.6 Da    PI: 10.8793
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027103361.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP121.59.8e-38901982104
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.....eaesssssasnsssg... 88 
                     ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai+++tgt++ +a ++      ++   s a++++s+   
  XP_027103361.1  90 PPKRTSTKDRHTKVEGRGRRIRMPATCAARVFQLTKELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMsvngtLKVPTTSPAAADNSNtvk 184
                     689*************************************************************7777733322221111111111111111111 PP

             TCP  89 ........kaaksaakskksqksa 104
                                        s +++
  XP_027103361.1 185 rkrkrpsnY----------SADQH 198
                     111111110..........11111 PP

Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    
MGSAQKLELH GDQSRNGSNL NNPWPRPPST AVQPLRMPPA PPMAIPLISL KEEPDDHGED  60
KPPIPMARSS QPLPMPTPLQ MRQPVAPPTP PKRTSTKDRH TKVEGRGRRI RMPATCAARV  120
FQLTKELGHK SDGETIRWLL EHAEPAIIAA TGTGTVPAIA MSVNGTLKVP TTSPAAADNS  180
NTVKRKRKRP SNYSADQHVN MPTNTDDNVA TSTGNTSTSS TTTMSTFSSN NPSILAPLMA  240
IQPSTSTTNA SPAMVQNPAI LQVPLVAAIP VVTNISPTFF ILPPPPQVPS SSSTNVPSHV  300
AANQSQILAI PPNVNVNVTP FINVSARPIS AFIASSSTTP SAANALNIQQ LPRFLNVVRG  360
PTTMENLRVN SSATLLPSSS STSSDKSPST RTQVLREFSL EIHDKHEQQN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1183190VKRKRKRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45680.14e-56TCP family protein