PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027103298.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | bHLH | ||||||||
Protein Properties | Length: 351aa MW: 38351.7 Da PI: 5.5254 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.8 | 6.1e-11 | 180 | 225 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ ++f L ++P + kK++K ++L A+ Y+k+L+ XP_027103298.1 180 HIIAERKRREQLSQRFVALSAIVPGL-----KKMDKTSVLGDAITYLKHLK 225 899***********************.....9*****************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 351 aa Download sequence |
MDNSATSWFS DLGMEDPFLS DQCDIMDFFD EDICAALGND FQGSLPSESN SPSCISHLIP 60 RSSSTTALCN ASSSAVEVPQ PAANLCASSA IEIPPAEVER PARQLKRNRS IPVILAFGNP 120 SPTETVNPRQ VSLGGLNPED DAVSEVLTSR VSFPNLEEAT KSAPAPKKGR TRPASQTYDH 180 IIAERKRREQ LSQRFVALSA IVPGLKKMDK TSVLGDAITY LKHLKERVKT LEEQATKQKM 240 QSVVLVKKSQ LVVEDEGSSD EQRPLPEIEA KLCDKKVLLR VHCENHRGVL VKVLSEIEKL 300 NLAVSNTSVA PFGSLALDIT IIAEMDKEFS LTMKELVQGL RSALQRAARD S |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 184 | 189 | ERKRRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37850.1 | 1e-49 | bHLH family protein |