PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027103096.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | MYB_related | ||||||||
Protein Properties | Length: 251aa MW: 27709 Da PI: 9.9799 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 37 | 7.9e-12 | 96 | 141 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++W++eE+ ++ + ++lG+g+Wk I++ + Rt+ q+ s+ q y XP_027103096.1 96 KPWSEEEHRSFLLGLEKLGKGDWKGISKNFVHSRTPTQVASHAQXY 141 58*****************************9***********988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MVKASLRKCS HCGHNGNCSR TCNGKGIKLF GVKINVVEDD YANRQNESIR KSKSMGNLET 60 CNGECNVPDD ADGYVSDGLI HESSGAKTAH ERRKGKPWSE EEHRSFLLGL EKLGKGDWKG 120 ISKNFVHSRT PTQVASHAQX YFLRLMTATE RKKRRTSVFD IPLDEMASTS KLPSASNSHN 180 APISPQFGVR DHGQGLPACT PPPNVSFLPI WNFSNQKFAP SPTTAAKYTR GPAVAQPPAL 240 HFRGFHHIFH P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61620.1 | 7e-56 | MYB_related family protein |