PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027102790.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

WRKY

Protein Properties

Length: 525aa MW: 57599.2 Da PI: 5.8156

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027102790.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.8	3e-30	247	306	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ XP_027102790.1 247 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 306 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 525 aa Download sequence
MGPEETGMEI DLSLKLDAQR EERTTEDQDD RHRQEVGKFP AEGKRETEVE EEAVDQEGHT 60 TVDNSVCDET MKTEEISVLQ LEMDRMKEEN KALRKAVEQT MKDYYDLQMK FSVVQQNIQT 120 KDPRTFLSLT GNNNSPSHEE QNKGSPRFLE MNHQTPPSTA QEDDAKQRHE LGLSLTLQSS 180 STSQEKEDEY MGNIEKKEDT PKALITPMQN KLQRSSSLGG GISNHLSSPP NRKARVSVRA 240 RCEAATMNDG CQWRKYGQKI AKGNPCPRAY YRCTVAPGCP VRKQVQRCLE DMSILITTYE 300 GTHNHPLPVG ATAMASTASA AASFMLLDSS NPLSSDGIMS NFNRSAPFPY QSPQFINPSL 360 SYASNLINIH PNDPSKGIVL DLTHNVNADA RQFPIASSSS QQPSHSWMPK PLPGNYIGNN 420 ATNIVSDLFP RQLVEGGIGP KGEGNKLLAE NVSAIASDPK FRVAVAAAIS SLINKETQTT 480 TTSHPPMAPS LIPTRDGEGG GTSSNSKNWI LESLSTGGKP IQNSP

Sequence ? help Back to Top

Protein Sequence Length: 525 aa Download sequence

MGPEETGMEI DLSLKLDAQR EERTTEDQDD RHRQEVGKFP AEGKRETEVE EEAVDQEGHT  60
TVDNSVCDET MKTEEISVLQ LEMDRMKEEN KALRKAVEQT MKDYYDLQMK FSVVQQNIQT  120
KDPRTFLSLT GNNNSPSHEE QNKGSPRFLE MNHQTPPSTA QEDDAKQRHE LGLSLTLQSS  180
STSQEKEDEY MGNIEKKEDT PKALITPMQN KLQRSSSLGG GISNHLSSPP NRKARVSVRA  240
RCEAATMNDG CQWRKYGQKI AKGNPCPRAY YRCTVAPGCP VRKQVQRCLE DMSILITTYE  300
GTHNHPLPVG ATAMASTASA AASFMLLDSS NPLSSDGIMS NFNRSAPFPY QSPQFINPSL  360
SYASNLINIH PNDPSKGIVL DLTHNVNADA RQFPIASSSS QQPSHSWMPK PLPGNYIGNN  420
ATNIVSDLFP RQLVEGGIGP KGEGNKLLAE NVSAIASDPK FRVAVAAAIS SLINKETQTT  480
TTSHPPMAPS LIPTRDGEGG GTSSNSKNWI LESLSTGGKP IQNSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	4e-71	WRKY family protein