PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027102346.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family TCP
Protein Properties Length: 281aa    MW: 31764.3 Da    PI: 9.975
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027102346.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP97.32.8e-3049153389
             TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg......... 88 
                     g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+LG+ ++sk ++WL+ + k +i++l+ ++ ++ s+++ ++    +++ss++         
  XP_027102346.1  49 GGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVVDWLIDATKSEIDKLPPLQIQAGSFSQFHQAIALSQHSSATssnlphffc 143
                     79*************************************************************88888777444444444433333333445555 PP

             TCP  89 .........k 89 
                               
  XP_027102346.1 144 anpsymkdvG 153
                     5554444440 PP

Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MIMNSKDKAF QTKQEGDVND SKFSKSASTS RPWAGFRNPR IVRVSRSFGG KDRHSKVCTV  60
RGLRDRRIRL SVPTAIQLYD LQDRLGLSQP SKVVDWLIDA TKSEIDKLPP LQIQAGSFSQ  120
FHQAIALSQH SSATSSNLPH FFCANPSYMK DVGAPSFLSN KQGLKINDHI HGNSQTILDR  180
SRCWNPDVAV NRKEAEKEAA AGKDKWIASN EQEGMEGYAA QLTAQNFFPE ATPIFQCNPK  240
TLKVIMPYLW DLQWLSRLVL SCVSVLLQQQ FLRFFLHCLH I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60970.13e-46TCP family protein