PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027101862.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family C2H2
Protein Properties Length: 433aa    MW: 48878 Da    PI: 8.5498
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027101862.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.00021375395223
                     EETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                     +C+ Cgk+F  ++ L+ H++++
  XP_027101862.1 375 PCSQCGKPF-KPEKLHAHMKSC 395
                     5********.**********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    
MKRRLMESNQ VGAEVRRIHV IYFLSRKGRI EQPHLIRVHH LSRNGVHLRD VKRWLGELRG  60
KDMPESFSWS YKRRYKSGYV WQDLLDEDLI TPISDNEYVL KGSEISSTTT IEDSPSEKRY  120
SMHKEEEDSD RIPSSTEENP DDDHHHHQET KMDQPTKISS PEIEEESPTF GSEQSSTLTD  180
DSMKTKDRDQ DQEKNSSFQT PKEEMHEESD KSEGSSYYSP LSSKRNKKAN NVMSEEKISA  240
APSSSASTSS TAQPSFSKSR SYSNASHLFR NLITCGAVET NDSVMLTISR RNKPPANANL  300
SSLDKQNHVS NGTKELLQIG DKLGGSQRIF GTNWNQQRQS SGRKSFDGVR ASQKNNSEFN  360
NQKTNAAHKP IYGPPCSQCG KPFKPEKLHA HMKSCKGMKA WAKYSGPAIS TAAADKPAES  420
PQENLVSGYY LTH