PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027101526.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 478aa MW: 53561.8 Da PI: 6.3442

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027101526.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	149.8	1.3e-46	9	134	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp GfrF+Ptdeel+++yL+ k++g++ e+ +vi+evd++k+ePwdLp+ +k+++ ew+fF++rd+ky++g+r nrat++gyWkatgkd++++ XP_027101526.1 9 LPLGFRFRPTDEELINHYLRLKINGRHDEV-QVIPEVDVCKWEPWDLPQlsVIKTDDPEWFFFCPRDRKYPNGHRXNRATDAGYWKATGKDRTIK 102 699**********************999.99**********95457888889********************************9 PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s++ k fy+grapkge+t W+mheyr+ XP_027101526.1 103 SHR---SSPSKDSCFYRGRAPKGERTXWIMHEYRA 134 933...344556689****************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MGVVSTESLP LGFRFRPTDE ELINHYLRLK INGRHDEVQV IPEVDVCKWE PWDLPQLSVI 60 KTDDPEWFFF CPRDRKYPNG HRXNRATDAG YWKATGKDRT IKSHRSSPSK DSCFYRGRAP 120 KGERTXWIMH EYRATEPDLD GTASGQAAYV LCRLFHKPDE KADSSKYDEV EPSGSSPNTV 180 KSSPDDASSD LFQERLILDM QVASNQLVLR GDVEDHLIEA AITEVYPTTG GHPMCHESRD 240 GLDCKVFSPL VSQNHTEIGC PDSPFADDFX DQKGMHFQDG TSEQDVSLTE LLHVLQNDDA 300 YPCKESTSEK FLYVGSRSML PDQLHEGPAG NCNPRDWGAF GKAGEDMVIE QTLTCPRSFQ 360 SQAPIRDADS RLSNDVGASH DHYADPVSLG GDHQEGTGIK IHRRQASNRP GCENLAKQGT 420 AARRFRLQVD SAPIANHDGK YSRAKALAMK NKTNARLQLR MTSIPNLHAH LMSQRGKQ

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MGVVSTESLP LGFRFRPTDE ELINHYLRLK INGRHDEVQV IPEVDVCKWE PWDLPQLSVI  60
KTDDPEWFFF CPRDRKYPNG HRXNRATDAG YWKATGKDRT IKSHRSSPSK DSCFYRGRAP  120
KGERTXWIMH EYRATEPDLD GTASGQAAYV LCRLFHKPDE KADSSKYDEV EPSGSSPNTV  180
KSSPDDASSD LFQERLILDM QVASNQLVLR GDVEDHLIEA AITEVYPTTG GHPMCHESRD  240
GLDCKVFSPL VSQNHTEIGC PDSPFADDFX DQKGMHFQDG TSEQDVSLTE LLHVLQNDDA  300
YPCKESTSEK FLYVGSRSML PDQLHEGPAG NCNPRDWGAF GKAGEDMVIE QTLTCPRSFQ  360
SQAPIRDADS RLSNDVGASH DHYADPVSLG GDHQEGTGIK IHRRQASNRP GCENLAKQGT  420
AARRFRLQVD SAPIANHDGK YSRAKALAMK NKTNARLQLR MTSIPNLHAH LMSQRGKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	1e-120	NAC family protein