PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027101524.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 227aa MW: 25728.7 Da PI: 10.7908

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027101524.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	87.9	9.9e-28	26	80	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtp LH++F++av++LGG+ +AtPk+i+ m+++ +t +h+kSHLQkYRl XP_027101524.1 26 KPRIRWTPGLHNCFIKAVDRLGGPFEATPKEIMTQMDIPEVTSSHIKSHLQKYRL 80 79****************************************************8 PP
2	Myb_DNA-binding	39.9	9.6e-13	30	79	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWT+ ++ +++av +lGg+ t+k I+ m t ++ks++qky+ XP_027101524.1 30 RWTPGLHNCFIKAVDRLGGPfeaTPKEIMTQMDiPEVTSSHIKSHLQKYR 79 9*******************************778**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MAAKGNDIKI LHTSDRQLQV AENTRKPRIR WTPGLHNCFI KAVDRLGGPF EATPKEIMTQ 60 MDIPEVTSSH IKSHLQKYRL RMGCNSGTAA DSTVARKAAT NTMFEADDGS NTAGWRTNDI 120 RYIQVQDIQS TNSYLKKFVL LTPEASNLCK HKGLSLKGRE NFARRRIQTM WSNIKCNVLG 180 TKTSIQAPDI KGEKGKREQK MKMFSIWKDK MGRRSKVIII SSVHYST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04030.1	1e-18	G2-like family protein