PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027101449.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | TCP | ||||||||
Protein Properties | Length: 348aa MW: 38326.4 Da PI: 7.5328 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 101.8 | 1.2e-31 | 33 | 126 | 2 | 66 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............................s 66 +g+kdrhsk+ T++g+RdRRvRls ++a++f+d+qd+LG+d++sk+i+WL+++ak+ai++l + + XP_027101449.1 33 TGRKDRHSKVGTARGPRDRRVRLSPNTAIEFYDVQDRLGYDRPSKAIDWLMKEAKAAIDALEHDssyatttnldgcsilmqprnplpekgldvQ 126 79*************************************************************9666666655555555555544444444441 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 348 aa Download sequence |
MQDVSNQGST RLKPKRAKGN SIEIPGGRIF RSTGRKDRHS KVGTARGPRD RRVRLSPNTA 60 IEFYDVQDRL GYDRPSKAID WLMKEAKAAI DALEHDSSYA TTTNLDGCSI LMQPRNPLPE 120 KGLDVQEESR INCSESACRI DGQEYMNNDD TSINNFSFFS MENGVIPTTS SLGFYSYPHG 180 GDLSTSRNNK SQTQGLSPSF HTVQDFSFLF SGGQQGLIPP PSSSSHCQGE INSETARCQR 240 ILAWNSNSSN AKGSQETLVN SELPLHFPSP FDQNQLLFHR EPLQSSFSPI RGPTLDSQFP 300 NLCFSSARFS SDGGLSELSA AARIPGPEKQ KPVSSKPSSP TNLLHYQD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31070.1 | 3e-36 | TCP family protein |